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SpeciesDistributionToolkit.jl

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Gabriel Dansereau, Michael Catchen, Timothée Poisot

SpeciesDistributionToolkit.jl is a collection of packages for species distribution modeling and biodiversity research, for the Julia programming language. The package offers a series of methods to access data required to build species distribution models, including: 1) a wrapper around the GBIF occurrences API to access occurrence data 2) a ...

Last Update: 2024

Data reporting Data management Data analysis Species populations Community composition Terrestrial Marine Freshwater

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SpeciesDistributionToolkit.jl is a collection of packages for species distribution modeling and biodiversity research, for the Julia programming language. The package offers a series of methods to access data required to build species distribution models, including: 1) a wrapper around the GBIF occurrences API to access occurrence data 2) a wrapper around the Phylopic images API 3) ways to generate fake occurrences with statistical properties similar to actual occurrences 4) ways to generate pseudo-absences based on a series of heuristics 5) a simple way to represent layers as mutable objects 6) utility functions for teaching species distribution models 7) a way to collect historic and future climate and land-use data to feed into the models, pre-loaded with datasets like CHELSA, WorldClim, EarthEnv, PaleoClim, etc 8) an interface to Makie for plotting and data visualisation

Contact person: Timothée Poisot
Contact e-mail: timothee.poisot@umontreal.ca
Contact Organization: Université de Montréal
License: MIT
Technical Status: Finish and with constant technical support
URL(s): https://github.com/PoisotLab/SpeciesDistributionToolkit.jl
https://poisotlab.github.io/SpeciesDistributionToolkit.jl/v1.0.0/

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